Columnar database management
Analysis of products and issues in column-oriented database management systems. Related subjects include:
This is part of a three-post series on Kudu, a new data storage system from Cloudera.
- Part 1 is an overview of Kudu technology.
- Part 2 (this post) is a lengthy dive into how Kudu writes and reads data.
- Part 3 is a brief speculation as to Kudu’s eventual market significance.
Let’s talk in more detail about how Kudu stores data.
- As previously noted, inserts land in an in-memory row store, which is periodically flushed to the column store on disk. Queries are federated between these two stores. Vertica taught us to call these the WOS (Write-Optimized Store) and ROS (Read-Optimized Store) respectively, and I’ll use that terminology here.
- Part of the ROS is actually another in-memory store, aka the DeltaMemStore, where updates and deletes land before being applied to the DiskRowSets. These stores are managed separately for each DiskRowSet. DeltaMemStores are checked at query time to confirm whether what’s in the persistent store is actually up to date.
- A major design goal for Kudu is that compaction should never block – nor greatly slow — other work. In support of that:
- Compaction is done, server-by-server, via a low-priority but otherwise always-on background process.
- There is a configurable maximum to how big a compaction process can be — more precisely, the limit is to how much data the process can work on at once. The current default figure = 128 MB, which is 4X the size of a DiskRowSet.
- When done, Kudu runs a little optimization to figure out which 128 MB to compact next.
- Every tablet has its own write-ahead log.
- This creates a practical limitation on the number of tablets …
- … because each tablet is causing its own stream of writes to “disk” …
- … but it’s only a limitation if your “disk” really is all spinning disk …
- … because multiple simultaneous streams work great with solid-state memory.
- Log retention is configurable, typically the greater of 5 minutes or 128 MB.
- Metadata is cached in RAM. Therefore:
- ALTER TABLE kinds of operations that can be done by metadata changes only — i.e. adding/dropping/renaming columns — can be instantaneous.
- To keep from being screwed up by this, the WOS maintains a column that labels rows by which schema version they were created under. I immediately called this MSCC — Multi-Schema Concurrency Control — and Todd Lipcon agreed.
- Durability, as usual, boils down to “Wait until a quorum has done the writes”, with a configurable option as to what constitutes a “write”.
- Servers write to their respective write-ahead logs, then acknowledge having done so.
- If it isn’t too much of a potential bottleneck — e.g. if persistence is on flash — the acknowledgements may wait until the log has been fsynced to persistent storage.
- There’s a “thick” client library which, among other things, knows enough about the partitioning scheme to go straight to the correct node(s) on a cluster.
|Categories: Cloudera, Columnar database management, Hadoop, Solid-state memory, SQL/Hadoop integration||20 Comments|
This is part of a three-post series on Kudu, a new data storage system from Cloudera.
- Part 1 (this post) is an overview of Kudu technology.
- Part 2 is a lengthy dive into how Kudu writes and reads data.
- Part 3 is a brief speculation as to Kudu’s eventual market significance.
Cloudera is introducing a new open source project, Kudu,* which from Cloudera’s standpoint is meant to eventually become the single best underpinning for analytics on the Hadoop stack. I’ve spent multiple hours discussing Kudu with Cloudera, mainly with Todd Lipcon. Any errors are of course entirely mine.
*Like the impala, the kudu is a kind of antelope. I knew that, because I enjoy word games. What I didn’t know — and which is germane to the naming choice — is that the kudu has stripes.
- Kudu is an alternative to HDFS (Hadoop Distributed File System), or to HBase.
- Kudu is meant to be the underpinning for Impala, Spark and other analytic frameworks or engines.
- Kudu is not meant for OLTP (OnLine Transaction Processing), at least in any foreseeable release. For example:
- Kudu doesn’t support multi-row transactions.
- There are no active efforts to front-end Kudu with an engine that is fast at single-row queries.
- Kudu is rather columnar, except for transitory in-memory stores.
- Kudu’s core design points are that it should:
- Accept data very quickly.
- Immediately make that data available for analytics.
- More specifically, Kudu is meant to accept, along with slower forms of input:
- Lots of fast random writes, e.g. of web interactions.
- Streams, viewed as a succession of inserts.
- Updates and inserts alike.
- The core “real-time” use cases for which Kudu is designed are, unsurprisingly:
- Low-latency business intelligence.
- Predictive model scoring.
- Kudu is designed to work fine with spinning disk, and indeed has been tested to date mainly on disk-only nodes. Even so, Kudu’s architecture is optimized for the assumption that there will be at least some flash on the node.
- Kudu is designed primarily to support relational/SQL processing. However, Kudu also has a nested-data roadmap, which of course starts with supporting the analogous capabilities in Impala.
|Categories: Business intelligence, Cloudera, Columnar database management, Database compression, Databricks, Spark and BDAS, Hadoop, HBase, Predictive modeling and advanced analytics, Solid-state memory, SQL/Hadoop integration||5 Comments|
At the highest level:
- Presto is, roughly speaking, Facebook’s replacement for Hive, at least for queries that are supposed to run at interactive speeds.
- Teradata is announcing support for Presto with a classic open source pricing model.
- Presto will also become, roughly speaking, Teradata’s replacement for Hive.
- Teradata’s Presto efforts are being conducted by the former Hadapt.
Now let’s make that all a little more precise.
Regarding Presto (and I got most of this from Teradata)::
- To a first approximation, Presto is just another way to write SQL queries against HDFS (Hadoop Distributed File System). However …
- … Presto queries other data stores too, such as various kinds of RDBMS, and federates query results.
- Facebook at various points in time created both Hive and now Presto.
- Facebook started the Presto project in 2012 and now has 10 engineers on it.
- Teradata has named 16 engineers – all from Hadapt – who will be contributing to Presto.
- Known serious users of Presto include Facebook, Netflix, Groupon and Airbnb. Airbnb likes Presto well enough to have 1/3 of its employees using it, via an Airbnb-developed tool called Airpal.
- Facebook is known to have a cluster cited at 300 petabytes and 4000 users where Presto is presumed to be a principal part of the workload.
Daniel Abadi said that Presto satisfies what he sees as some core architectural requirements for a modern parallel analytic RDBMS project: Read more
I talked with my clients at MemSQL about the release of MemSQL 4.0. Let’s start with the reminders:
- MemSQL started out as in-memory OTLP (OnLine Transaction Processing) DBMS …
- … but quickly positioned with “We also do ‘real-time’ analytic processing” …
- … and backed that up by adding a flash-based column store option …
- … before Gartner ever got around to popularizing the term HTAP (Hybrid Transaction and Analytic Processing).
- There’s also a JSON option.
The main new aspects of MemSQL 4.0 are:
- Geospatial indexing. This is for me the most interesting part.
- A new optimizer and, I suppose, query planner …
- … which in particular allow for serious distributed joins.
- Some rather parallel-sounding connectors to Spark. Hadoop and Amazon S3.
- Usual-suspect stuff including:
- More SQL coverage (I forgot to ask for details).
- Some added or enhanced administrative/tuning/whatever tools (again, I forgot to ask for details).
- Surely some general Bottleneck Whack-A-Mole.
There’s also a new free MemSQL “Community Edition”. MemSQL hopes you’ll experiment with this but not use it in production. And MemSQL pricing is now wholly based on RAM usage, so the column store is quasi-free from a licensing standpoint is as well.
|Categories: Amazon and its cloud, Columnar database management, Databricks, Spark and BDAS, GIS and geospatial, Hadoop, Investment research and trading, Market share and customer counts, MemSQL, NewSQL, Pricing, Structured documents||8 Comments|
My client Teradata bought my (former) clients Revelytix and Hadapt.* Obviously, I’m in confidentiality up to my eyeballs. That said — Teradata truly doesn’t know what it’s going to do with those acquisitions yet. Indeed, the acquisitions are too new for Teradata to have fully reviewed the code and so on, let alone made strategic decisions informed by that review. So while this is just a guess, I conjecture Teradata won’t say anything concrete until at least September, although I do expect some kind of stated direction in time for its October user conference.
*I love my business, but it does have one distressing aspect, namely the combination of subscription pricing and customer churn. When your customers transform really quickly, or even go out of existence, so sometimes does their reliance on you.
I’ve written extensively about Hadapt, but to review:
- The HadoopDB project was started by Dan Abadi and two grad students.
- HadoopDB tied a bunch of PostgreSQL instances together with Hadoop MapReduce. Lab benchmarks suggested it was more performant than the coyly named DBx (where x=2), but not necessarily competitive with top analytic RDBMS.
- Hadapt was formed to commercialize HadoopDB.
- After some fits and starts, Hadapt was a Cambridge-based company. Former Vertica CEO Chris Lynch invested even before he was a VC, and became an active chairman. Not coincidentally, Hadapt had a bunch of Vertica folks.
- Hadapt decided to stick with row-based PostgreSQL, Dan Abadi’s previous columnar enthusiasm notwithstanding. Not coincidentally, Hadapt’s performance never blew anyone away.
- Especially after the announcement of Cloudera Impala, Hadapt’s SQL-on-Hadoop positioning didn’t work out. Indeed, Hadapt laid off most or all of its sales and marketing folks. Hadapt pivoted to emphasize its schema-on-need story.
- Chris Lynch, who generally seems to think that IT vendors are created to be sold, shopped Hadapt aggressively.
As for what Teradata should do with Hadapt: Read more
|Categories: Aster Data, Citus Data, Cloudera, Columnar database management, Data warehousing, Hadapt, Hadoop, MapReduce, Oracle, SQL/Hadoop integration, Teradata||7 Comments|
As part of my series on the keys to and likelihood of success, I outlined some examples from the DBMS industry. The list turned out too long for a single post, so I split it up by millennia. The part on 20th Century DBMS success and failure went up Friday; in this one I’ll cover more recent events, organized in line with the original overview post. Categories addressed will include analytic RDBMS (including data warehouse appliances), NoSQL/non-SQL short-request DBMS, MySQL, PostgreSQL, NewSQL and Hadoop.
DBMS rarely have trouble with the criterion “Is there an identifiable buying process?” If an enterprise is doing application development projects, a DBMS is generally chosen for each one. And so the organization will generally have a process in place for buying DBMS, or accepting them for free. Central IT, departments, and — at least in the case of free open source stuff — developers all commonly have the capacity for DBMS acquisition.
In particular, at many enterprises either departments have the ability to buy their own analytic technology, or else IT will willingly buy and administer things for a single department. This dynamic fueled much of the early rise of analytic RDBMS.
Buyer inertia is a greater concern.
- A significant minority of enterprises are highly committed to their enterprise DBMS standards.
- Another significant minority aren’t quite as committed, but set pretty high bars for new DBMS products to cross nonetheless.
- FUD (Fear, Uncertainty and Doubt) about new DBMS is often justifiable, about stability and consistent performance alike.
A particularly complex version of this dynamic has played out in the market for analytic RDBMS/appliances.
- First the newer products (from Netezza onwards) were sold to organizations who knew they wanted great performance or price/performance.
- Then it became more about selling “business value” to organizations who needed more convincing about the benefits of great price/performance.
- Then the behemoth vendors became more competitive, as Teradata introduced lower-price models, Oracle introduced Exadata, Sybase got more aggressive with Sybase IQ, IBM bought Netezza, EMC bought Greenplum, HP bought Vertica and so on. It is now hard for a non-behemoth analytic RDBMS vendor to make headway at large enterprise accounts.
- Meanwhile, Hadoop has emerged as serious competitor for at least some analytic data management, especially but not only at internet companies.
Otherwise I’d say: Read more
I’m commonly asked to assess vendor claims of the kind:
- “Our system lets you do multiple kinds of processing against one database.”
- “Otherwise you’d need two or more data managers to get the job done, which would be a catastrophe of unthinkable proportion.”
So I thought it might be useful to quickly review some of the many ways organizations put multiple data stores to work. As usual, my bottom line is:
- The most extreme vendor marketing claims are false.
- There are many different choices that make sense in at least some use cases each.
Horses for courses
It’s now widely accepted that different data managers are better for different use cases, based on distinctions such as:
- Short-request vs. analytic.
- SQL vs. non-SQL (NoSQL or otherwise).
- Expensive/heavy-duty vs. cheap/easy-to-support.
Vendors are part of this consensus; already in 2005 I observed
For all practical purposes, there are no DBMS vendors left advocating single-server strategies.
Vendor agreement has become even stronger in the interim, as evidenced by Oracle/MySQL, IBM/Netezza, Oracle’s NoSQL dabblings, and various companies’ Hadoop offerings.
Multiple data stores for a single application
We commonly think of one data manager managing one or more databases, each in support of one or more applications. But the other way around works too; it’s normal for a single application to invoke multiple data stores. Indeed, all but the strictest relational bigots would likely agree: Read more
One of my lesser-known clients is Citus Data, a largely Turkish company that is however headquartered in San Francisco. They make CitusDB, which puts a scale-out layer over a collection of fully-functional PostgreSQL nodes, much like Greenplum and Aster Data before it. However, in contrast to those and other Postgres-based analytic MPP (Massively Parallel Processing) DBMS:
- CitusDB does not permanently fork PostgreSQL; Citus Data has committed to always working with the latest PostgreSQL release, or at least with one that’s less than a year old.
- Citus Data never made the “fat head” mistake — if a join can’t be executed directly on the CitusDB data-storing nodes, it can’t be executed in CitusDB at all.
- CitusDB follows the modern best-practice of having many virtual nodes on each physical node. Default size of a virtual node is one gigabyte. Each virtual node is technically its own PostgreSQL table.*
- Citus Data has already introduced an open source column-store option for PostgreSQL, which CitusDB of course exploits.
*One benefit to this strategy, besides the usual elasticity and recovery stuff, is that while PostgreSQL may be single-core for any given query, a CitusDB query can use multiple cores by virtue of hitting multiple PostgreSQL tables on each node.
Citus has thrown a few things against the wall; for example, there are two versions of its product, one which involves HDFS (Hadoop Distributed File System) and one of which doesn’t. But I think Citus’ focus will be scale-out PostgreSQL for at least the medium-term future. Citus does have actual customers, and they weren’t all PostgreSQL users previously. Still, the main hope — at least until the product is more built-out — is that existing PostgreSQL users will find CitusDB easy to adopt, in technology and price alike.
|Categories: Aster Data, Citus Data, Columnar database management, Data warehousing, Database compression, Greenplum, Hadoop, Parallelization, PostgreSQL, SQL/Hadoop integration, Transparent sharding, Workload management||6 Comments|
I stopped by MemSQL last week, and got a range of new or clarified information. For starters:
- Even though MemSQL (the product) was originally designed for OLTP (OnLine Transaction Processing), MemSQL (the company) is now focused on analytic use cases …
- … which was the point of introducing MemSQL’s flash-based columnar option.
- One MemSQL customer has a 100 TB “data warehouse” installation on Amazon.
- Another has “dozens” of terabytes of data spread across 500 machines, which aggregate 36 TB of RAM.
- At customer Shutterstock, 1000s of non-MemSQL nodes are monitored by 4 MemSQL machines.
- A couple of MemSQL’s top references are also Vertica flagship customers; one of course is Zynga.
- MemSQL reports encountering Clustrix and VoltDB in a few competitive situations, but not NuoDB. MemSQL believes that VoltDB is still hampered by its traditional issues — Java, reliance on stored procedures, etc.
On the more technical side: Read more
|Categories: Clustering, Clustrix, Columnar database management, Data warehousing, Database compression, In-memory DBMS, MemSQL, NewSQL, NuoDB, Specific users, Vertica Systems, VoltDB and H-Store, Workload management, Zynga||18 Comments|
I frequently am asked questions that boil down to:
- When should one use NoSQL?
- When should one use a new SQL product (NewSQL or otherwise)?
- When should one use a traditional RDBMS (most likely Oracle, DB2, or SQL Server)?
The details vary with context — e.g. sometimes MySQL is a traditional RDBMS and sometimes it is a new kid — but the general class of questions keeps coming. And that’s just for short-request use cases; similar questions for analytic systems arise even more often.
My general answers start:
- Sometimes something isn’t broken, and doesn’t need fixing.
- Sometimes something is broken, and still doesn’t need fixing. Legacy decisions that you now regret may not be worth the trouble to change.
- Sometimes — especially but not only at smaller enterprises — choices are made for you. If you operate on SaaS, plus perhaps some generic web hosting technology, the whole DBMS discussion may be moot.
In particular, migration away from legacy DBMS raises many issues: Read more
|Categories: Columnar database management, Couchbase, HBase, In-memory DBMS, Microsoft and SQL*Server, NewSQL, NoSQL, OLTP, Oracle, Parallelization, SAP AG||17 Comments|